Евгений Кунин - Логика случая. О природе и происхождении биологической эволюции
- Название:Логика случая. О природе и происхождении биологической эволюции
- Автор:
- Жанр:
- Издательство:Литагент «Центрполиграф»a8b439f2-3900-11e0-8c7e-ec5afce481d9
- Год:2014
- Город:Москва
- ISBN:978-5-227-04982-7
- Рейтинг:
- Избранное:Добавить в избранное
-
Отзывы:
-
Ваша оценка:
Евгений Кунин - Логика случая. О природе и происхождении биологической эволюции краткое содержание
В этой амбициозной книге Евгений Кунин освещает переплетение случайного и закономерного, лежащих в основе самой сути жизни. В попытке достичь более глубокого понимания взаимного влияния случайности и необходимости, двигающих вперед биологическую эволюцию, Кунин сводит воедино новые данные и концепции, намечая при этом дорогу, ведущую за пределы синтетической теории эво люции. Он интерпретирует эволюцию как стохастический процесс, основанный на заранее непредвиденных обстоятельствах, ограниченный необходимостью поддержки клеточной организации и направляемый процессом адаптации. Для поддержки своих выводов он объединяет между собой множество концептуальных идей: сравнительную геномику, проливающую свет на предковые формы; новое понимание шаблонов, способов и непредсказуемости процесса эволюции; достижения в изучении экспрессии генов, распространенности белков и других фенотипических молекулярных характеристик; применение методов статистической физики для изучения генов и геномов и новый взгляд на вероятность самопроизвольного появления жизни, порождаемый современной космологией.
Логика случая демонстрирует, что то понимание эволюции, которое было выработано наукой XX века, является устаревшим и неполным, и обрисовывает фундаментально новый подход – вызывающий, иногда противоречивый, но всегда основанный на твердых научных знаниях.
Логика случая. О природе и происхождении биологической эволюции - читать онлайн бесплатно ознакомительный отрывок
Интервал:
Закладка:
Begley, T. J., and L. D. Samson. (2003) Molecular Biology: A Fix for RNA. Nature 421: 795–796.
Behe, M. J. (2006). Darwin’s Black Box: The Biochemical Challenge to Evolution . New York: Free Press.
Behm-Ansmant, I., I. Kashima, J. Rehwinkel, J. Sauliere, N. Wittkopp, and E. Izaurralde. (2007) mRNA Quality Control: An Ancient Machinery Recognizes and Degrades mRNAs with Nonsense Codons. FEBS Lett 581: 2,845—2,853.
Beiko, R. G., and N. Hamilton. (2006) Phylogenetic Identification of Lateral Genetic Transfer Events. BMC Evol Biol 6: 15.
Beiko, R. G., T. J. Harlow, and M. A. Ragan. (2005) Highways of Gene Sharing in Prokaryotes. Proc Natl Acad Sci USA 102: 14,332—14,337.
Beringer, M., and M. V. Rodnina. (2007) The Ribosomal Peptidyl Transferase. Mol Cell 26: 311–321.
Bezier, A., M. Annaheim, J. Herbiniere, C. Wetterwald, G. Gyapay, S. Bernard-Samain, P. Wincker, I. Roditi, M. Heller, M. Belghazi, R. Pfister-Wilhem, G. Periquet, C. Dupuy, E. Huguet, A. N. Volkoff, B. Lanzrein, and J. M. Drezen. (2009) Polydnaviruses of Braconid Wasps Derive from an Ancestral Nudivirus. Science 323: 926–930.
Bhattacharya, D., J. M. Archibald, A. P. Weber, and A. Reyes-Prieto. (2007) How Do Endosymbionts Become Organelles? Understanding Early Events in Plastid Evolution. Bioessays 29: 1,239—1,246.
Bidle, K. D., and P. G. Falkowski. (2004) Cell Death in Planktonic, Photosynthetic Microorganisms. Nat Rev Microbiol 2: 643–655.
Biebricher, C. K., and M. Eigen. (2005) The Error Threshold. Virus Res 107: 117–127.
Bigot, Y., S. Samain, C. Auge-Gouillou, and B. A. Federici. (2008) Molecular Evidence for the Evolution of Ichnoviruses from Ascoviruses by Symbiogenesis. BMC Evol Biol 8: 253.
Bjedov, I., O. Tenaillon, B. Gerard, V. Souza, E. Denamur, M. Radman, F. Taddei, and I. Matic. (2003) Stress-Induced Mutagenesis in Bacteria. Science 300: 1,404—1,409.
Blanchard, S. C., R. L. Gonzalez, H. D. Kim, S. Chu, and J. D. Puglisi. (2004) tRNA Selection and Kinetic Proofreading in Translation. Nat Struct Mol Biol 11: 1,008—1,014.
Blasius, M., S. Sommer, and U. Hubscher. (2008) Deinococcus Radiodurans: What Belongs to the Survival Kit? Crit Rev Biochem Mol Biol 43: 221–238.
Blencowe, B. J. (2006) Alternative Splicing: New Insights from Global Analyses. Cell 126: 37–47.
Bokov, K., and S. V. Steinberg. (2009) A Hierarchical Model for Evolution of 23s Ribosomal RNA. Nature 457: 977–980.
Bolotin, A., B. Quinquis, A. Sorokin, and S. D. Ehrlich. (2005) Clustered Regularly Interspaced Short Palindrome Repeats (Crisprs) Have Spacers of Extrachro mosomal Origin. Microbiology 151: 2,551—2,561.
Bonner, J. T. (2004) Perspective: The Size-Complexity Rule. Evolution 58: 1,883—1,890.
Bostrom, Nick. (2002) Anthropic Bias: Observation Selection Effects in Science and Philosphy . New York and London: Rutledge.
Bourc’his, D., and O. Voinnet. (2010) A Small-RNA Perspective on Gametogenesis, Fertilization, and Early Zygotic Development. Science 330: 617–622.
Bousso, R. (2006) Holographic Probabilities in Eternal Inflation. Phys Rev Lett 97: 19,1302.
Bousso, R., and J. Polchinski. (2004) The String Theory Landscape. Sci Am 291: 78–87.
Bowman, G. R., V. A. Voelz, and V. S. Pande. (2011) Taming the Complexity of Protein Folding. Curr Opin Struct Biol 21: 4—11.
Branco, M. R., and A. Pombo. (2007) Chromosome Organization: New Facts, New Models. Trends Cell Biol 17: 127–134.
Brinkmann, H., and H. Philippe. (2007) The Diversity of Eukaryotes and the Root of the Eukaryotic Tree. Adv Exp Med Biol 607: 20–37.
Brisson, D. (2003) The Directed Mutation Controversy in an Evolutionary Context. Crit Rev Microbiol 29: 25–35.
Brochier-Armanet, C., B. Boussau, S. Gribaldo, and P. Forterre. (2008) Mesophilic Crenarchaeota: Proposal for a Third Archaeal Phylum, the Thaumarchaeota. Nat Rev Microbiol 6: 245–252.
Bromham, L., and D. Penny. (2003) The Modern Molecular Clock. Nat Rev Genet 4: 216–224.
Brookfield, J. F. (2009) Evolution and Evolvability: Celebrating Darwin 200. Biol Lett 5: 44–46.
Brouns, S. J., M. M. Jore, M. Lundgren, E. R. Westra, R. J. Slijkhuis, A. P. Snijders, M. J. Dickman, K. S. Makarova, E. V. Koonin, and J. van der Oost. (2008) Small CRISPR RNAs Guide Antiviral Defense in Prokaryotes. Science 321: 960–964.
Bruggeman, F. J., and H. V. Westerhoff. (2007) The Nature of Systems Biology. Trends Microbiol 15: 45–50.
Burger, R., M. Willensdorfer, and M. A. Nowak. (2006) Why Are Phenotypic Mutation Rates Much Higher Than Genotypic Mutation Rates? Genetics 172: 197–206.
Burki, F., K. Shalchian-Tabrizi, and J. Pawlowski. (2008) Phylogenomics Reveals a New «Megagroup» Including Most Photosynthetic Eukaryotes. Biol Lett 4: 366–369.
Bushman, F. (2001) Lateral DNA Transfer: Mechanisms and Consequences. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
Cairns, J., J. Overbaugh, and S. Miller. (1988) The Origin of Mutants. Nature 335: 142–145.
Cairns, J., G. S. Stent, and J. D. Watson, eds. (1966) Phage and the Origins of Molecular Biology, Cold Spring Harbor, NY: CSHL Press.
Carmel, L., Y. I. Wolf, I. B. Rogozin, and E. V. Koonin. (2007) Three Distinct Modes of Intron Dynamics in the Evolution of Eukaryotes. Genome Res 17: 1,034—1,044.
Carroll, L. (1872). Through the Looking Glass and What Alice Found There. London: Macmillan.
Carroll, S. (2010) From Eternity to Here: The Quest for the Ultimate Theory of Time. New York: Penguin.
Carter, B. (1974) Large Number Coincidences and the Anthropic Principle in Cosmology in Confrontation of Cosmological Theories with Observational Data . M. S. Longair, editor. Dordrecht: D. Reidel, pp. 291–298.
Casino, P., V. Rubio, and A. Marina. (2010) The Mechanism of Signal Transduction by Two-Component Systems. Curr Opin Struct Biol 20: 763–771.
Cavalier-Smith, T. (1998) A Revised Six-Kingdom System of Life. Biol Rev Camb Philos Soc 73: 203–266.
Cech, T. R. (2002) Ribozymes, the First 20 Years. Biochem Soc Trans 30: 1,162—1,166.
Chan, C. X., A. E. Darling, R. G. Beiko, and M. A. Ragan. (2009) Are Protein Domains Modules of Lateral Genetic Transfer? PLoS One 4: e4524.
Chargaff, E. (1978) Heraclitean Fire: Sketches from a Life Before Nature. New York: Rockefeller University Press.
Charlebois, R. L., and W. F. Doolittle. (2004) Computing Prokaryotic Gene Ubiquity: Rescuing the Core from Extinction. Genome Res 14: 2,469—2,477.
Chen, I., P. J. Christie, and D. Dubnau. (2005) The Ins and Outs of DNA Transfer in Bacteria. Science 310: 1,456—1,460.
Cheng, L. K., and P. J. Unrau. (2010) Closing the Circle: Replicating RNA with RNA. Cold Spring Harb Perspect Biol 2: a002204.
Chernikova, D., S. Motamedi, M. Csuros, E. V. Koonin, and I. B. Rogozin. (2011) A Late Origin of the Extant Eukaryotic Diversity: Divergence Time Estimates Using Rare Genomic Changes. Biol Direct, in press.
Ciccarelli, F. D., T. Doerks, C. von Mering, C. J. Creevey, B. Snel, and P. Bork. (2006) Toward Automatic Reconstruction of a Highly Resolved Tree of Life. Science 311: 1,283—1,287.
Clapier, C. R., and B. R. Cairns. (2009) The Biology of Chromatin Remodeling Complexes. Annu Rev Biochem 78: 273–304.
Claverie, J. M. (2006) Viruses Take Center Stage in Cellular Evolution. Genome Biol 7: 110.
Collins, L., and D. Penny. (2005) Complex Spliceosomal Organization Ancestral to Extant Eukaryotes. Mol Biol Evol 22: 1,053—1,066.
Cortez, D., P. Forterre, and S. Gribaldo. (2009) A Hidden Reservoir of Integrative Elements Is the Major Source of Recently Acquired Foreign Genes and Orfans in Archaeal and Bacterial Genomes. Genome Biol 10: R65.
Costanzo, G., S. Pino, F. Ciciriello, and E. Di Mauro. (2009) Generation of Long RNA Chains in Water. J Biol Chem 284: 33,206—33,216.
Costanzo, G., R. Saladino, C. Crestini, F. Ciciriello, and E. Di Mauro. (2007) Nucleoside Phosphorylation by Phosphate Minerals. J Biol Chem 282: 16,729—16,735.
Cox, C. J., P. G. Foster, R. P. Hirt, S. R. Harris, and T. M. Embley. (2008) The Archaebacterial Origin of Eukaryotes. Proc Natl Acad Sci USA 105: 20,356—20,361.
Cox, M. M., and J. R. Battista. (2005) Deinococcus Radiodurans – the Consummate Survivor. Nat Rev Microbiol 3: 882–892.
Crick, F. (1970) Central Dogma of Molecular Biology. Nature 227: 561–563.
Crick, F. H. (1958) On Protein Synthesis. Symp Soc Exp Biol 12: 138–163.
Crick, F. H. (1968) The Origin of the Genetic Code. J Mol Biol 38: 367–379.
Csuros, M., and I. Miklos. (2009) Streamlining and Large Ancestral Genomes in Archaea Inferred with a Phylogenetic Birth-and-Death Model. Mol Biol Evol 26: 2,087—2,095.
Csuros, M., I. B. Rogozin, and E. V. Koonin. (2011) Resonstructed HumanLike Intron Density in the Last Common Ancestor of Eukaryotes. PLoS Comput Biol, in press.
D’Herelle, F. (1922). The Bacteriophage; Its Role in Immunity . Baltimore: Williams and Wilkins. Dagan, T., and W. Martin. (2006) The Tree of One Percent. Genome Biol 7: 118.
Daly, M. J. (2009) A New Perspective on Radiation Resistance Based on Deinococcus Radiodurans. Nat Rev Microbiol 7: 237–245.
Danchin, A. (2003). The Delphic Boat: What Genomes Tell Us . Cambridge, MA: Harvard Univ Press.
Darwin, C. (1859) On the Origin of Species . London: Murray. Darwin, C. (1872) Origin of Species . New York: The Modern Library.
Daubin, V., and H. Ochman. (2004) Bacterial Genomes As New Gene Homes: The Genealogy of Orfans in E. Coli. Genome Res 14: 1,036—1,042.
Davidov, Y., and E. Jurkevitch. (2009) Predation Between Prokaryotes and the Origin of Eukaryotes. Bioessays 31: 748–757.
Daviter, T., K. B. Gromadski, and M. V. Rodnina. (2006) The Ribosome’s Response to Codon-Anticodon Mismatches. Biochimie 88: 1,001—1,011.
Dawkins, R. (1996) The Blind Watchmaker: Why the Evidence of Evolution Reveals a Universe Without Design. London: W.W. Norton & Co.
Dawkins, R. (2006) The Selfish Gene: 30th Anniversary Edition – with a New Introduction by the Author. Oxford: Oxford University Press.
Читать дальшеИнтервал:
Закладка:
